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Old 11-11-2013, 05:10 PM   #1
angerusso
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Smile difference between rr ff and rf reads

Hi:

I am wondering which fusion should I prioritize from a couple of candidates.

As you know tophat fusion generates a list with the direction of fusion mentioned as well. I am not a biologist and am wondering should I use directionality to prioritize one vs another to investigate further. E.g. are "rf" or "fr" be higher priority compared to "rr" or "ff".

Any suggestions, reference and biological insights will be greatly useful.

Thanks a ton!
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Old 11-11-2013, 07:52 PM   #2
lindenb
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cross posted on biostars: http://www.biostars.org/p/86183/
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Old 11-12-2013, 12:44 AM   #3
dpryan
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Answered over on biostars.
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