Originally posted by ecSeq Bioinformatics
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Ok. I understand now that SEGEMEHL is not a fusion genes finder and it has never been used for this. It has the same potential to be used for fusion finder as BLAT/BOWTIE/BWA for example.
I got confused because the authors of SEGEMEHL claim in the title of their paper:
Hoffmann et al. A multi-split mapping algorithm for circular RNA, splicing, trans-splicing, and FUSION DETECTION, Genome Biol. 2014.
that SEGEMEHL does FUSION DETECTION when actually it does not.
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