Can anyone tell me how long it took for Illumina to commision your HiSeq after delivery. I've just had a timetable sent to me which takes a little over two months and that doesn't include the training!
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Originally posted by juan View Post200 million reads per lane? Is that the standard or are you pushing the limit? What is the standard # of reads/lane for a HiSeq?
Is the RTA of the HiSeq the same as GAII? In a GAII run the low-quality ends of reads are flagged with a quality score of 2 (ASCII B). Does the HiSeq RTA also output reads in this manner? What % of reads in the first and second run of a pair are low quality (QV=2)?
Is it comparable to GAII (<15% in first run, up to 40% in second run).
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