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Old 08-03-2011, 01:55 AM   #1
louis7781x
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Location: Hong Kong

Join Date: Oct 2010
Posts: 74
Default The problem of running soapfusion

Hi,I have a problem about running soapfusion.
After running soapfusion short(Alignment).I have alreay got result.out and result.2Seqs.

But when I ran perl soapfusion.pl(fusion discovery),I don't understand what is the annotation file (.psl) in description of maual.

I have use NMToTreefam.txt for <ref_Gene.psl> and refGeneTrRegionFinal for <ref_Gene_exon_region.psl>.However,It can't output the result.

It is because I ran incorrect annotation file in step of fusion discovery?
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