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Old 05-27-2011, 04:27 AM   #1
extari
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Location: Bilbao (Spain)

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Post SRA files

Hi there!

Does anyone know how to create the SRA file to submit in the NCBI database?? My read data input are four .sff files, which I can merge in an only one .sff file with sfffile tool of roche software.

Thanks
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Old 05-27-2011, 04:34 AM   #2
sklages
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No need to convert SFF to SRA for submission. But be aware that NCBI has closed down their SRA submission stuff .. except for a few types of data.
Look at http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?

Go for ENA instead (EBI).
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Old 05-27-2011, 05:19 AM   #3
extari
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ahm... ok

so... what can I do? my sff reads correspond to a transcriptome sequencing...

Help!
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Old 05-27-2011, 05:49 AM   #4
sklages
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You might want to start here ..
http://www.ebi.ac.uk/ena/about/sra_submissions
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454 data analysis, ncbi, short read archive, submission

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