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Old 03-14-2013, 09:50 AM   #1
Location: NJ

Join Date: Feb 2010
Posts: 54
Default Heuristic search for contaminant motifs

Is anyone aware of a tool to search DNA sequence data (i.e fasta) for repeated motifs that may be vector, adapter or other contaminant with no a-priori information? I'm thinking something like k-mer counting would be implemented for this..
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