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Figuring out gene pathway/interaction after gene annotation Sunil Kamalakar Bioinformatics 2 09-06-2012 07:48 AM

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Old 11-14-2014, 07:15 AM   #1
Location: Italy

Join Date: Jul 2012
Posts: 30
Default How to get a Pathway map from a given transcriptome annotation

Hi all,
I have a complete transcriptome annotation performed with blast and got the UniPathways associated with the SwissProt ids.
Now I wanted to generate the most important pathways maps of the transcriptome. Do exist some tool to do this that I can download and execute on my machine? I also would like to get a graphical result not only data files like xgml.

Thanks you all

angeloulivieri is offline   Reply With Quote
Old 07-07-2015, 01:17 AM   #2
Location: Switzerland

Join Date: Apr 2013
Posts: 55

Hi, angeloulivieri,

I am also interested in it!

May I ask have you already got the information?



sadiexiaoyu is offline   Reply With Quote

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