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Old 08-06-2016, 12:25 PM   #1
Location: USA

Join Date: Aug 2014
Posts: 33
Default index bowtie2


I get this error when running bowtie2-build:

Traceback (most recent call last):
File "/home/lab410/bin/bowtie2-build", line 26, in <module>
import logging
File "/usr/local/lib/python2.7/logging/", line 26, in <module>
import sys, os, time, cStringIO, traceback, warnings, weakref
File "/usr/local/lib/python2.7/", line 14, in <module>
from _weakref import (
ImportError: No module named _weakref

How to solve it? thanks
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Old 08-07-2016, 11:33 AM   #2
Devon Ryan
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480

Somehow your installation of python got completely screwed up. Your best bet is to uninstall and reinstall python.
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