SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
Crossbow alignment format alpo Genomic Resequencing 1 10-10-2013 06:19 PM
Problem running cb_local; maybe manifest file? axiom7 General 2 05-08-2013 09:24 AM
Crossbow 1.0.0 help please Michael Robinson General 16 05-07-2013 10:08 AM
Running crossbow on Hadoop kumar.manoj412 General 0 07-18-2010 04:25 AM
Crossbow + Hadoop er.surendersharma Bioinformatics 2 07-14-2010 07:37 PM

Reply
 
Thread Tools
Old 10-07-2013, 04:24 PM   #1
Ashwinub
Junior Member
 
Location: Brisbane

Join Date: Sep 2013
Posts: 7
Default Crossbow manifest file

Hello,

I am trying to run Crossbow via the Web Interface. My EMR job keeps failing. I think its because of the .manifest file. My manifest file contents are as follows

http://bucki.bmi.ohio-state.edu/hpc/...125.1M.1.fq.gz 0 http://bucki.bmi.ohio-state.edu/hpc/...125.1M.2.fq.gz 0

Can anyone please correct my manifest file if it is wrong?

Thanks,
Ashwin
Ashwinub is offline   Reply With Quote
Reply

Tags
aws, crossbow, emr, genome, hadoop

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 12:29 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO