Hi,
I recently received data from illumina, and I am unable to determine the file format or how to convert it to a fastq for bwa. I found lots of documentation on a format called qseq, and several conversion scripts, but it doesn't seem to be the format I'm dealing with and the scripts don't work.
The lines in the files look like this:
I recently received data from illumina, and I am unable to determine the file format or how to convert it to a fastq for bwa. I found lots of documentation on a format called qseq, and several conversion scripts, but it doesn't seem to be the format I'm dealing with and the scripts don't work.
The lines in the files look like this:
Code:
NAME:3:1:1138:1083#0/1:ATATATGAGTGGGGTATAAACGGAGATTGATTTCGT:abababbababbbb`bbaaa]b_ab`aa]^_a_``^
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