I'm getting a malloc error when running cuffcompare v0.8.2 on Mac OS X.
Here is the verbose messaging when the error appears:
Has anyone else seen this? Cole et al, let me know if you want any additional data to help debug this.
Gene
Here is the verbose messaging when the error appears:
Code:
Missed introns: 77098/240992 ( 32.0%) Wrong introns: 3732/127345 ( 2.9%) Missed loci: 0/25081 ( 0.0%) Wrong loci: 100521/156958 ( 64.0%) Tracking transcripts across 10 query files.. Processing sequence from fasta file '/Users/gene/Bioinformatics/sequence_db/hg19/chromosomes/chr1.fa' Processing sequence from fasta file '/Users/gene/Bioinformatics/sequence_db/hg19/chromosomes/chr2.fa' Processing sequence from fasta file '/Users/gene/Bioinformatics/sequence_db/hg19/chromosomes/chr3.fa' Processing sequence from fasta file '/Users/gene/Bioinformatics/sequence_db/hg19/chromosomes/chr4.fa' Processing sequence from fasta file '/Users/gene/Bioinformatics/sequence_db/hg19/chromosomes/chr5.fa' cuffcompare(42796) malloc: *** error for object 0x1d0630e20: incorrect checksum for freed object - object was probably modified after being freed. *** set a breakpoint in malloc_error_break to debug Abort trap
Gene