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Does any one know if there are any standard summary statistics and metric files available for viewing anywhere? If not, is there any non-standard summary reports available. I'm looking for relatively simply metrics, like alignment %, Coverage, GC content, % bases > 10x, etc. Not limited to anything though. Any help would be appreciated. Thanks
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What are you looking to get from those?
There are tens of publicly available sequence data sets in SRA. You can choose something that interests you and create your own reports.
I see that you have posted this in "Genome Re-sequencing" so is this query about whole genomes?Last edited by GenoMax; 02-23-2015, 06:07 PM.
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The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist on Modified Bases...Yesterday, 07:01 AM -
Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...04-04-2024, 04:25 PM
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