Hi,
I'm working with GBS data and i used Stacks and ipyrad to call de novo based SNP's, apart from the quantity of SNP's called by each software what else can i use to validate the quality of each pipeline?
it is possible to measure the accuaracy of the de novo based called SNP's ?
I'm working with GBS data and i used Stacks and ipyrad to call de novo based SNP's, apart from the quantity of SNP's called by each software what else can i use to validate the quality of each pipeline?
it is possible to measure the accuaracy of the de novo based called SNP's ?