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Old 01-21-2014, 10:57 AM   #1
J.David
Junior Member
 
Location: Chile

Join Date: Aug 2013
Posts: 1
Lightbulb MaSurCa Assembler Coverage.

Hi everybody, im working with a De NOVO plant assembly and i used two differents Assemblers, Mira and Masurca, i got a problem with how to know the real coverage in the MaSurCa analisys, because Masurca made super reads with the reads for make the assembly genome and like the literature say, this one is between 2.X an 4.X for a high coverage Illumina sequencing. My question is if somebody how to calculate the real coverage in the MaSurCa genome assembly?.
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