SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
NCBI SRA database bair Bioinformatics 15 11-03-2015 02:06 PM
data set from NCBI SRA masylichu RNA Sequencing 2 10-27-2015 04:27 PM
Convert fastq from NCBI SRA to fasta and qual? kmkocot Bioinformatics 7 10-09-2012 10:15 AM
SRA - SRR*.lite.sra adrian Bioinformatics 2 03-19-2012 10:43 AM
454 /NCBI SRA & traceinfo v_kisand Bioinformatics 7 12-28-2009 02:13 AM

Reply
 
Thread Tools
Old 02-02-2011, 09:04 AM   #1
cburger
Junior Member
 
Location: New York

Join Date: Feb 2011
Posts: 1
Default ncbi sra

I'm new to ncbi sra, and I think I'm not quite clear on the formats. When I download the sra files, what is the difference between filtered and non-filtered? I could only see a length difference. But when I tried to check whether one sequence present in the filtered file was also present in the unfiltered file I could not find it. Also I could neither in the filtered nor the unfiltered file recognize whether adapter sequences were still present. Are the files adapter removed?
Thanks for the help, C
cburger is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 03:58 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO