Is there any software available at the moment for looking at data from illumina Omni arrays?
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Illumina Omni CNV analysis
Hi,
I have problem in analyzing CNV for one sample. In this sample LRR profile around(0.0) remains FLAT, though not BAF profile (0.6 & 0.4) and as per ASCAT (software I am using) there is no copy number change.
Has any of you come across a similar issue?
Was wondering if it possible to analyze data with low cellularity and is more a technical issue of the software I am using.
Any pointers would be very helpful.
Best
Shruti
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