Hi everyone,
The = code in the refmap means that there was an exact match to an intron chain in the reference genome. I am not exactly sure what this means because I am working with Illumina RNA-seq reads and there technically should not be any introns in my data. Can someone help me understand what class code means and how it is possible.
Thank you.
The = code in the refmap means that there was an exact match to an intron chain in the reference genome. I am not exactly sure what this means because I am working with Illumina RNA-seq reads and there technically should not be any introns in my data. Can someone help me understand what class code means and how it is possible.
Thank you.