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Old 03-29-2017, 09:23 AM   #1
ronaldrcutler
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Location: Virginia

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Default Averaging TPM counts among replicates

Hello all,

I calculated TPM counts from an un-normalized HTSeq-count output file for a number of replicates. I am wondering how should I go about averaging these counts among replicates?

Should I attempt normalizing them in DESeq2? If so, I'm not familiar with how to do this.

Thanks in advance
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