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Old 06-14-2017, 06:30 AM   #1
Irina Astrovskaya
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Location: NYC

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Default What are the best tools/practices for CNV detection/analysis?

I am looking for the current state-of-the-art tools/practices for CNV (structural variation) detection/analysis for family (trio) data produced by Illumina.

I will have data obtained on Illumina SNP arrays as well as from Illumina whole exome sequencing and whole-genome sequencing.
What would be the best tools to apply for each technology?

Any advice/suggestion is highly appreciated

Thank you!
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cnv calling, snp arrays, structural variation, whole exome sequencing, whole genome sequencing

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