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Old 05-22-2012, 03:38 PM   #1
kjaja
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Default Help getting data from the 1000 genomes project

I am looking for variants called in the 1000 genomes Chinese population in vcf format. Is this possible to download from the 1000 genomes website? If so where can I find such data that is population specific?.
thanks
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Old 05-28-2012, 02:50 AM   #2
laura
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Hello

You may find it helpful to go through our tutorials

http://www.1000genomes.org/using-1000-genomes-data

Our most recent release contains variants from 2 different chinese populations, the Hapmap Han Chinese and some Southern Han Chinese. There are also variants from the Hapmap Japanese population

For more information about our recent release please see

http://www.1000genomes.org/announcem...lls-2012-03-16

There is a panel file which lists all the individuals who are part of the release

ftp://ftp.1000genomes.ebi.ac.uk/vol1...1123.ALL.panel

thanks
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