Greetings,
New grad student here working with a fungi with a genome that is roughly 42-50Mbs. Basically what I'm trying to do is an assembly with filtered sub reads in fastq format which came from a set of PacBio sequencing. Any recommendations on programs to use to assemble these would be much appreciated.
Also interested in combining assembly data from different sequencing technologies (Ion torrent, Illumnia, and PacBio) to create an overall better assembly and again would love to have a program recommended to start looking at.
New grad student here working with a fungi with a genome that is roughly 42-50Mbs. Basically what I'm trying to do is an assembly with filtered sub reads in fastq format which came from a set of PacBio sequencing. Any recommendations on programs to use to assemble these would be much appreciated.
Also interested in combining assembly data from different sequencing technologies (Ion torrent, Illumnia, and PacBio) to create an overall better assembly and again would love to have a program recommended to start looking at.
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