Hello,
For statistical study, we would like to generate simulated data, based on Binomial negative distribution. To properly estimate distribution parameters, we are looking for a public dataset studying two conditions (control vs treated), with more than 3 replicates in each condition.
I know there we can find such experiments on SRA NCBI website, but we would like to avoid mapping steps (and SRA provides only reads and not counts).
Typically, we are looking for a publicly available RNASeq experiment with as many replicates as possible and proposing results as a simple table of raw counts (samples in column, features in line).
Does anyone know where we could find such kind of table ?
Thanks in advance for your help.
Luc
For statistical study, we would like to generate simulated data, based on Binomial negative distribution. To properly estimate distribution parameters, we are looking for a public dataset studying two conditions (control vs treated), with more than 3 replicates in each condition.
I know there we can find such experiments on SRA NCBI website, but we would like to avoid mapping steps (and SRA provides only reads and not counts).
Typically, we are looking for a publicly available RNASeq experiment with as many replicates as possible and proposing results as a simple table of raw counts (samples in column, features in line).
Does anyone know where we could find such kind of table ?
Thanks in advance for your help.
Luc
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