Hi guys
is it possible to extract isoforms of a single cell line with out comparing it to other cell lines by using Cufflinks & tophat ??
If it is possible how could I filter alternative splicing events like exon skipping and others?
(FYI: Cufflinks paper is over single cell line but different time points but my question just referring to a single cell line not any time points)
Thanx in advance
is it possible to extract isoforms of a single cell line with out comparing it to other cell lines by using Cufflinks & tophat ??
If it is possible how could I filter alternative splicing events like exon skipping and others?
(FYI: Cufflinks paper is over single cell line but different time points but my question just referring to a single cell line not any time points)
Thanx in advance
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