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Old 01-03-2012, 12:17 PM   #1
bbsinfo
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Location: Mars

Join Date: Apr 2011
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Default MFold question

Hello, I am very new to field of studying RNA secondary structure. I am working with algae organelle genome. In mitochondrial genome, I have about 25 tRNA genes, and 3 rRNA genes.
I would like to use MFold software to study and draw their secondary sturcture.
I searched online, I am not sure whether you are also using the MFold on this website: http://mfold.rna.albany.edu/?q=mfold/download-mfold

I tried to the "RNA Folding Form" under "Application" on the lefthand side.

I learn how to run my data on this website, It seems that they really focus on calculating the melting temperature, delta G etc.
I do not seem to be able to find the secondary structure picture, which draws rRNA in loops and stem structure.
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