SEQanswers

Go Back   SEQanswers > Applications Forums > RNA Sequencing



Similar Threads
Thread Thread Starter Forum Replies Last Post
Flexible isoform-level differential expression analysis with Ballgown Ben Langmead Bioinformatics 0 03-30-2014 10:39 AM
Survey: RNA-Seq analysis for Differential Gene/Transcript Expression bodhisattvax Bioinformatics 14 06-12-2013 09:06 AM
Transcript Length Bias in Differential Expression Analysis [DESeq] tdyo Bioinformatics 2 04-29-2013 03:15 PM
Velvet/Oases transcript expression level? simon.jarman@aad.gov.au RNA Sequencing 3 08-11-2010 09:47 AM

Reply
 
Thread Tools
Old 10-31-2016, 12:23 PM   #1
subriotech
Junior Member
 
Location: seoul,korea

Join Date: Oct 2016
Posts: 1
Post GFold analysis for transcript-level differential expression

Hi all,

I have an experimental setup consisting of a treatment and a control sample without any replicates. So far, I have obtained the differential expression data from the company using GFold to analyze the gene-level differential expression.

However, my interest lies in comparison of transcript-level expression. I would like to know if there is a way to use GFold to compare transcript-level expression. The documentation is quite sketchy although it states that the transcripts are mapped to the gene and the counts are compared.

Thanks and regards,
Sub
subriotech is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 06:07 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO