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Old 01-06-2012, 07:55 AM   #1
Location: Mars

Join Date: Apr 2011
Posts: 19
Default recomend a software to detect splice sites on plant genes?

Hello, I need a software for me to use to detect splice sites on genes to find introns on genes.
I find a website

which is for vertebrate, and maize.

I am working with plants. the website above does not seem to work well with my organism. or I did not setup the correct parameter for it to work
what is Suboptimal exon cutoff? what number shall i set up to?

any suggestions? many thanks

Last edited by bbsinfo; 01-06-2012 at 07:59 AM.
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