Go Back   SEQanswers > Sequencing Technologies/Companies > SOLiD

Similar Threads
Thread Thread Starter Forum Replies Last Post
Color-space mapping with Bowtie ikarus97 Bioinformatics 3 06-30-2011 08:56 AM
Very Bad Mapping Results with several mapping softwares xquan Bioinformatics 13 05-22-2011 11:31 PM
Converting nucleotide-space to color-space javijevi Bioinformatics 7 11-29-2010 02:14 AM
junction mapping in color space Uwe Appelt Bioinformatics 19 10-26-2010 06:14 AM
direct mapping of color-space data against color-space begsch SOLiD 1 09-09-2009 09:25 PM

Thread Tools
Old 09-14-2009, 08:28 AM   #1
Junior Member
Location: Toronto

Join Date: Aug 2009
Posts: 1
Default Tools to convert WTAP mapping results to nucleotide space?

Hello all,

I've got some mapping results with SOLiD's Whole Transcriptome Analysis pipeline (WTAP), and would like to convert the mapped color reads back to nucleotide space.

This can be done for CoronaLite mapping results with and (using the -b option). But I have been unable to find the counterparts of these tools for WTAP mapping results. Does such a color-to-nucleotide conversion tool exist for WTAP mapped reads?


Last edited by kchu; 09-14-2009 at 08:30 AM. Reason: To insert a mistakenly omitted word.
kchu is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 10:48 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO