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Old 05-05-2016, 02:11 AM   #1
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Location: Cambridge

Join Date: Nov 2013
Posts: 7
Default How can Cuffnorm output give gene names in addition to gene id from input GTF file

Hi All,

I need a little help, the output of cuffnorm from the genes.fpkm_table file is as follows:

tracking_id q1_0 q2_0
ECDH10B_0001 0 0
ECDH10B_0002 12.7841 26.1493
ECDH10B_0003 20.8691 21.9675
ECDH10B_0004 25.1604 47.0917

How can I include the gene name in the output file in addition to the gene id which is also present in the input GTF file that I am using from ensembl. I am not discovering any new novel transcripts.

Can any one please help.

Thank you
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Old 05-05-2016, 06:15 AM   #2
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