Hello
cufflinks produces a gtf file of transcripts and I think it would be handy to be able to display this on the UCSC genome browser using the bigDataUrl method. Galaxy has a tool to go gtf -> gff3 and another gff3 -> bed from which one get get an indexed bigBed. Does anyone know of an existing tool that will take gtf -> bed?
Thanks
Mike
cufflinks produces a gtf file of transcripts and I think it would be handy to be able to display this on the UCSC genome browser using the bigDataUrl method. Galaxy has a tool to go gtf -> gff3 and another gff3 -> bed from which one get get an indexed bigBed. Does anyone know of an existing tool that will take gtf -> bed?
Thanks
Mike
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