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Old 05-18-2012, 11:49 AM   #1
ATD
Junior Member
 
Location: Washington DC

Join Date: May 2012
Posts: 1
Default Cufflinks 2.0.0 installation errors

Hello,
I have tried these steps http://seqanswers.com/forums/showthr...?t=4589&page=3.

However, cufflinks 2 installation doesn't work. I tried all 3 verions of Boost 1.47 to 1.49.

We are running RHEL5.4
Linux 2.6.18-194.11.4.el5 #1 SMP Fri Sep 17 04:57:05 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux

The boost configure is

./bjam --prefix=$HOME/local --toolset=gcc architecture=x86 link=static runtime-link=static stage install

The cufflinks configure is
./configure --prefix=$HOME/local --with-boost=$HOME/local --with-bam=$HOME/local --with-eigen=$HOME/local


The error is
libcufflinks.a(assemble.o):/home/atd/local/include/boost/thread/tss.hpp:84: more undefined references to `boost::detail::get_tss_data(void const*)' follow
collect2: ld returned 1 exit status
make[2]: *** [cufflinks] Error 1
make[2]: Leaving directory `/home/atd/tmp/cufflinks-2.0.0/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/atd/tmp/cufflinks-2.0.0'
make: *** [all] Error 2


Please help me.
Thank you.
Andy
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Old 05-21-2012, 05:42 AM   #2
GenoMax
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Location: East Coast USA

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Posts: 7,077
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Is the boost library path correctly set? See this thread for some additional info: http://seqanswers.com/forums/showthread.php?t=19805
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Old 01-24-2020, 03:11 AM   #3
Verbrugghen
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This boost version has some changing and these changes are good for everyone we can now manage the different cases at one time. This version is too much helpful for the book report writing services so that’s why book writers buy this paid version for unlocking all the services.
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