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08-31-2011, 07:14 PM
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Junior Member
Location: Seattle Join Date: Aug 2011
Posts: 1
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RNAseq with solid fasq.
Hi everyone, I am new at Galaxy website as well as NGS. My primary work is to analyze gene expression using RNA-seq. I downloaded fasq files from ENAa, uploaded them into galaxy using ftp, mapped them using bowtie for solid and this is where I got lost.
HOW do I get fpkm or rpkm from these files? Please help Thank you very much Di Nguyen, postdoc U of Washington, WA |
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