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Thread | Thread Starter | Forum | Replies | Last Post |
Error when using bwa sampe -r option | yjx1217 | Bioinformatics | 2 | 01-17-2013 02:11 PM |
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BWA aln _ option for number of mismatch ??? | Sam64 | Bioinformatics | 2 | 10-25-2011 12:59 AM |
bwa index option bwtsw | sowmyai | Bioinformatics | 2 | 07-15-2010 10:30 AM |
BWA samse -n option | kellyv | Bioinformatics | 0 | 01-19-2010 12:15 PM |
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#1 |
Member
Location: Boston University Join Date: Mar 2011
Posts: 18
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Hi: This might be an easy question. I am using the new BWA-0.5.9 version, and there doesn't seem be a -b option for alignments to specify BAM file format as input. Does anyone know if it still handles BAM input, and perhaps I just don't need to specify an option for it, or what?
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#2 |
Member
Location: Boston University Join Date: Mar 2011
Posts: 18
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Nevermind. i will use a different version.
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