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Old 02-01-2011, 12:12 AM   #1
rwenang
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Default clustering paired-end reads

Hi Guys,

Anybody can tell me which tools to use for paired-end reads clustering?
In addition, I would like to do the clustering for 5 different datasets.

I looked through UCLUST and CD-HIT, and none of them mentioned paired-end clustering, or multi dataset clistering.
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Old 02-03-2011, 08:13 AM   #2
seb567
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According to which criterion do you want the grouping process to be executed ?
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Old 02-06-2011, 08:15 PM   #3
rwenang
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it will be a simple identity match (97%).
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