Hi all,
I 've use cutadapt to pre-processing my data but i have 2 quenstion about algorithm of quality trimminh in cutadapt:
1)Will Cutadapt scan from 3' end of read?
2)If scan from 3' end, is quality threshold (eg: 20) count by average quality or from which algorithm
Thanks in advance.
I 've use cutadapt to pre-processing my data but i have 2 quenstion about algorithm of quality trimminh in cutadapt:
1)Will Cutadapt scan from 3' end of read?
2)If scan from 3' end, is quality threshold (eg: 20) count by average quality or from which algorithm
Thanks in advance.
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