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Old 09-18-2012, 11:05 PM   #1
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Default Validate SNP calls from NGS sequencing data with genotying array

How can I validate SNP calls made on my NGS whole genome sequence data with a genotyping array such as Illumina OmniExpress?
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Old 09-20-2012, 09:05 PM   #2
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Originally Posted by bioinf newbie View Post
How can I validate SNP calls made on my NGS whole genome sequence data with a genotyping array such as Illumina OmniExpress?
Only if the SNP are present on the OmniExpress chip. You can check the marker list of OmniExpress in Illumina website
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