Hi everyone, Is there anyone who has worked with the Polyphen-2 standalone application??
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Hi,
Polyphen2 is a great tool for SNP annotations, works great with dbSNP annotations too!
For one of our projects we were trying to identify the dbSNP database version used...is it dbSNP137?
If so, is there a way we could download the database you use for the annotations?
Thanks much!
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Originally posted by rpauly View PostHi,
Polyphen2 is a great tool for SNP annotations, works great with dbSNP annotations too!
For one of our projects we were trying to identify the dbSNP database version used...is it dbSNP137?
If so, is there a way we could download the database you use for the annotations?
Thanks much!
dbSNP rsIDs which are found in the MapSNPs output (Batch query pipleine) are taken from UCSC Genome Browser snp135 track. These correspond to dbSNP build 135.
I am not sure I understand which database you want to download?
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