I have paired-end illumina data for some RNA-Seq analysis. There are four fasta files and are named like this.
Can anyone explain what do L001 and L002 stand for? I know R1 and R2 stand for two pairs. When I use paired end reads in some tools/packages, Do I need to use four of them? or only two?
HTML Code:
XXX_XXXXXX_L001_R1_001.fastq XXX_XXXXXX_L001_R2_001.fastq XXX_XXXXXX_L002_R1_001.fastq XXX_XXXXXX_L002_R2_001.fastq
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