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Old 07-24-2014, 10:06 PM   #1
Palgrave
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Default extract miRNA-loop from miRBase

Does anyone have a good way to extract miRNA-loop sequences from the miRBase database?
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Old 07-25-2014, 05:07 AM   #2
TiborNagy
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No. I have checked the FTP sites and the SQL tables. There is no loop sequence in miRBase. You can download hairpin sequences and use RNAfold on it.
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