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  • RPy issue in Galaxy on Biolinux 8

    Hi,

    I am using Galaxy in BioLinux8 and having a consistent issue with RPy e.g.

    Traceback (most recent call last):
    File "/usr/lib/galaxy-server/tools/plotting/histogram.py", line 5, in <module>
    from rpy import *
    File "/usr/lib/python2.7/dist-packages/rpy.py", line 134, in <module>
    """ % RVERSION)
    RuntimeError: No module named _rpy3030

    RPy module can not be imported. Please check if your rpy
    installation supports R 3.3.0. If you have multiple R versions
    installed, you may need to set RHOME before importing rpy. For
    example:

    >>> from rpy_options import set_options
    >>> set_options(RHOME='c:/progra~1/r/rw2011/')
    >>> from rpy import *

    As a biologist, could any offer a simple solution to this?

    Many thanks,

    John Hammond
    University of Reading, UK

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