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Old 03-14-2013, 03:36 PM   #1
Giorgio C
Location: ITALY

Join Date: Oct 2010
Posts: 89
Default How to filter Shrimp aligner output

Hi all,

I'm using Shrimp to analyze a set of miRNAs. Do you know any way or any scripts to filter and organize the output from Shrimp?

Like collapsing, filter out the alignments with indels or SNPs,low score,etc.

Thanks in advance,

Last edited by Giorgio C; 03-14-2013 at 05:18 PM.
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