Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
Number of Mapped reads ninad Genomic Resequencing 2 08-29-2013 05:15 AM
Number of Reads Rfriedman Bioinformatics 0 01-11-2012 02:43 PM
number of reads m_elena_bioinfo Bioinformatics 2 07-20-2010 09:47 AM
gsMapper: how to reduce number of gaps ? DNAjunk Bioinformatics 4 03-04-2010 01:15 AM
Does splitting run reduce read number? AKroxy 454 Pyrosequencing 2 01-04-2010 12:04 PM

Thread Tools
Old 10-11-2010, 09:27 AM   #1
Junior Member
Location: Austria

Join Date: Aug 2010
Posts: 5
Default reduce the number of reads


Who knows, how we can decrease the data set by python?

shangool is offline   Reply With Quote
Old 10-12-2010, 12:25 AM   #2
Simon Andrews
Location: Babraham Inst, Cambridge, UK

Join Date: May 2009
Posts: 871

I think you're going to need to be much more specific about exactly what you're trying to do. Your question is so generic that we're not going to be able to make a sensible guess at what you're actually trying to do.

If you want a general pointer towards python tools to help you work with next gen data then you might want to look at HTSeq which provides a python framework for dealing with this kind of data, and has lots of useful documentation which might help you.
simonandrews is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 09:51 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO