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Old 09-27-2017, 06:32 AM   #1
Location: barcelona

Join Date: Mar 2013
Posts: 18
Exclamation Consensus tree with missing data


I have a phylogenetic trees built from alignments of sequences of a set of genes (1 gene per tree), where the final nodes are the individual from which the gene was sequenced. I need to generate a consensus tree starting from the single gene trees, again where the final nodes are the individuals. I am not sure what is the correct term for this kind of tree, if it's consensus tree, or supertree.

Now ,I found some software that could help me, but my biggest problem is that the single gene trees have missing data (i.e. not all trees have all individuals).

Have someone had a similar situation, and what software or solution have you opted for?

Thanks in advance!
marco12345 is offline   Reply With Quote

consensus, gene, missing data, phylogeny, tree

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