Hello,
I am working on a pipeline to analyze some metabarcoding DNA samples from a MiSeq. I have read multiple papers that all use different programs for OTU clustering. Does anyone have suggestions on programs that work best (QIIME, Mothur, or UPARSE).
Thanks
I am working on a pipeline to analyze some metabarcoding DNA samples from a MiSeq. I have read multiple papers that all use different programs for OTU clustering. Does anyone have suggestions on programs that work best (QIIME, Mothur, or UPARSE).
Thanks
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