Hi All,
I was wondering if anyone could suggest a script that would allow me to comparatively analyse two genomes.
I was hoping I could use the gene (or protein) list of two organisms and input each list as a separate fasta file.
Then, the script would compare all of the CDS from each list and the output would be common (organisms 1), unique (organism 1), unique (organism 2) and contain in fasta each of the genes in fasta format.
cheers
I was wondering if anyone could suggest a script that would allow me to comparatively analyse two genomes.
I was hoping I could use the gene (or protein) list of two organisms and input each list as a separate fasta file.
Then, the script would compare all of the CDS from each list and the output would be common (organisms 1), unique (organism 1), unique (organism 2) and contain in fasta each of the genes in fasta format.
cheers
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