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Old 10-25-2012, 04:24 PM   #1
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Location: San Diego

Join Date: Oct 2012
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Default truncation of contig in velvet

Hi I have playing with velvet and I found this strange artifact when assembling data. When I have the following 2 sequences they get assembled into 2 contigs, both of which seem to have been clipped at the end.

Why was the "TAGTAATATAAAGATA..." not included in the contigs since the sequences matched exactly
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assembly, contig, sequence, velvet

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