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Old 02-23-2015, 02:34 PM   #1
yoyoming1001
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Default Publicly available Summary Statistics

Does any one know if there are any standard summary statistics and metric files available for viewing anywhere? If not, is there any non-standard summary reports available. I'm looking for relatively simply metrics, like alignment %, Coverage, GC content, % bases > 10x, etc. Not limited to anything though. Any help would be appreciated. Thanks
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Old 02-23-2015, 05:05 PM   #2
GenoMax
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Default

What are you looking to get from those?

There are tens of publicly available sequence data sets in SRA. You can choose something that interests you and create your own reports.

I see that you have posted this in "Genome Re-sequencing" so is this query about whole genomes?

Last edited by GenoMax; 02-23-2015 at 05:07 PM.
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