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Old 02-17-2017, 12:08 AM   #1
RoMI95
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Location: Navi Mumbai, Maharashtra, India

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Question Searching for databases and repositories for AML rna seq data

I am looking Rna seq data of AML patients. i have tried GDC portal and i only found data on only around 300 patients can someone suggest other databases or repositories that would give data on AML patients like the GDC portal?
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Old 04-06-2017, 02:19 AM   #2
Markiyan
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Lightbulb Find the detailed description of their RNAseq experimental & data analysis protocol.

Search for some recent papers on amyloid leukemia, where they had submitted the RNAseq data to the SRA and have a look at NCBI's SRA and EBI's ENA.

Last edited by Markiyan; 04-06-2017 at 02:26 AM. Reason: Posted in the wrong thread.
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Old 04-26-2017, 05:54 AM   #3
CraigRepositive
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I had a quick look on repositive (I was logged in) and found 1802 datasets matching to the term "RNA Seq AML" - you can see the results here: https://discover.repositive.io/datas...NA%20Seq%20AML

You don't need an account to this this list.

Most seem to be from SRA with 39 from Array Express
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acute myeloid leukemia, databases, ngs data, rna-seq

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