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ChIP-seq peak caller that handles biological replicates AnnaE Bioinformatics 6 05-13-2015 12:49 PM
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Old 11-13-2014, 03:37 AM   #1
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Default ODIN - A Differential Peak Caller for ChIP-seq data

I am happy to announce the tool ODIN, which our lab is using to analyse ChIP-seq data.

ODIN is an HMM-based approach to detect and analyse differential peaks in pairs of ChIP-seq data. ODIN performs genomic signal processing, peak calling and p-value calculation in an integrated framework.

For further details, please see

ManuelRWTHaices is offline   Reply With Quote
Old 11-23-2015, 10:31 AM   #2
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Dear all,

We have currently released a THOR, a HMM based methods, for differential peak calling with replicates.

best regards,

Ivan Costa is offline   Reply With Quote

chip-seq, differential peak caller, genomics, hmm

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