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Old 07-06-2015, 11:41 AM   #1
anibhax
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Location: Pittsburgh

Join Date: Jan 2013
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Default How to convert SOLiD BAMs to XSQ or csfasta?

Hi,

Is there a way to convert SOLiD BAMs back to csfasta or XSQ?

I know there is a tool for converting BAMs to fastq (bam2fastq). But I'm not sure if the same can be applied for SOLiD BAMs.

I need the raw reads and we lost our original XSQ files. Any help is appreciated.

Thanks!
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bam, csfasta, solid 5500, xsq

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