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Old 04-15-2010, 04:54 AM   #1
saurabh_igib
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Default how to mapp Next generation sequencing (NGS)data on Refrence genome ????

Dear All,
i wanted to use NGS data for my research project. i am working with SRA(NCBI) and have NGS data from different platform like Solexa , 454 GS20 and AB Solid.

can any one share information on what to mapp NGS data to reference genome for different platform..

u can share information in the form of online links , pdf and/or any resources.


regards

saurabh

saurabhvladdha@gmail.com

Last edited by saurabh_igib; 04-15-2010 at 04:59 AM.
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Old 04-15-2010, 09:22 AM   #2
steven
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Here is a thread about Galaxy: http://seqanswers.com/forums/showthread.php?t=4441
hope it helps.
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Old 04-15-2010, 05:13 PM   #3
tunliangliang
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It's also the question that I want to ask.Thanks for the question and the answer.
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Old 04-16-2010, 05:38 AM   #4
krobison
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Look in the software wiki under Mapping
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